STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMK1GCalcium/calmodulin dependent protein kinase IG; Belongs to the protein kinase superfamily. (476 aa)    
Predicted Functional Partners:
CALM1
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.841
CALM2
Calmodulin 2; Belongs to the calmodulin family.
   
 0.841
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
   
 0.841
CALML4
Calmodulin like 4.
   
 0.750
DUS2
Dihydrouridine synthase 2.
    
 
 0.469
DCX
Doublecortin.
 
  
 
 0.464
SYTL1
Synaptotagmin like 1.
      
 0.452
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
0.419
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.403
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.