STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRNProstaglandin F2 receptor inhibitor. (866 aa)    
Predicted Functional Partners:
CD9
Tetraspanin.
    
 
 0.865
CD81
Tetraspanin.
    
 
 0.697
TSPAN32
Tetraspanin 32; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.697
WDR3
WD repeat domain 3.
      
 0.684
GDAP2
Ganglioside induced differentiation associated protein 2.
      
 0.684
NHLH2
Nescient helix-loop-helix 2.
      
 0.684
CD99L2
CD99 molecule like 2.
      
 0.520
TSPAN3
Tetraspanin.
    
 
 0.517
TSPAN8
Tetraspanin.
    
 
 0.511
CD151
Tetraspanin.
    
 
 0.494
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.