STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A43Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family. (278 aa)    
Predicted Functional Partners:
U3JPM5_FICAL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.832
RPL14
Ribosomal protein L14.
   
 
 0.547
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.484
RPL8
Ribosomal protein L8.
   
 
 0.477
FRMD7
FERM domain containing 7.
      
 0.471
RPS23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.458
RNF113A
Uncharacterized protein.
      
 0.456
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.449
RPS13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.448
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.444
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.