Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LPCAT3 | RPL36AL | ENSFALP00000004801 | ENSFALP00000011784 | Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. | Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. | 0.434 |
LPCAT3 | ZBTB21 | ENSFALP00000004801 | ENSFALP00000002135 | Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. | Zinc finger and BTB domain containing 21. | 0.519 |
RIPK4 | ZBTB21 | ENSFALP00000002151 | ENSFALP00000002135 | Receptor interacting serine/threonine kinase 4. | Zinc finger and BTB domain containing 21. | 0.433 |
RPL36AL | LPCAT3 | ENSFALP00000011784 | ENSFALP00000004801 | Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. | Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. | 0.434 |
RPL36AL | ZBTB21 | ENSFALP00000011784 | ENSFALP00000002135 | Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. | Zinc finger and BTB domain containing 21. | 0.538 |
ZBTB21 | LPCAT3 | ENSFALP00000002135 | ENSFALP00000004801 | Zinc finger and BTB domain containing 21. | Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. | 0.519 |
ZBTB21 | RIPK4 | ENSFALP00000002135 | ENSFALP00000002151 | Zinc finger and BTB domain containing 21. | Receptor interacting serine/threonine kinase 4. | 0.433 |
ZBTB21 | RPL36AL | ENSFALP00000002135 | ENSFALP00000011784 | Zinc finger and BTB domain containing 21. | Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. | 0.538 |