STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HENMT1HEN methyltransferase 1. (372 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
   
 
 0.633
PLD6
Phospholipase D family member 6.
      
 0.630
U3JYT7_FICAL
Uncharacterized protein.
      
 0.563
TDRD9
Tudor domain containing 9.
     
 0.552
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
     
 0.551
HELZ2
Helicase with zinc finger 2.
     
 0.537
FKBP6
Peptidylprolyl isomerase.
      
 0.521
PIWIL1
Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.
    
 0.501
PIWIL2
Piwi domain-containing protein.
    
 0.501
PARN
Poly(A)-specific ribonuclease.
      
 0.459
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.