Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APLF | LIG3 | ENSFALP00000014250 | ENSFALP00000010173 | Uncharacterized protein. | DNA ligase. | 0.708 |
APLF | LIG4 | ENSFALP00000014250 | ENSFALP00000004386 | Uncharacterized protein. | DNA ligase. | 0.719 |
APLF | PARP1 | ENSFALP00000014250 | ENSFALP00000012122 | Uncharacterized protein. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.681 |
APLF | PRKDC | ENSFALP00000014250 | ENSFALP00000006031 | Uncharacterized protein. | Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.480 |
APLF | XRCC5 | ENSFALP00000014250 | ENSFALP00000004139 | Uncharacterized protein. | X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. | 0.949 |
APLF | XRCC6 | ENSFALP00000014250 | ENSFALP00000012453 | Uncharacterized protein. | X-ray repair cross complementing 6. | 0.920 |
ATM | DCLRE1C | ENSFALP00000000464 | ENSFALP00000002004 | Non-specific serine/threonine protein kinase. | DNA cross-link repair 1C. | 0.645 |
ATM | LIG4 | ENSFALP00000000464 | ENSFALP00000004386 | Non-specific serine/threonine protein kinase. | DNA ligase. | 0.787 |
ATM | MRE11 | ENSFALP00000000464 | ENSFALP00000000322 | Non-specific serine/threonine protein kinase. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.998 |
ATM | PARP1 | ENSFALP00000000464 | ENSFALP00000012122 | Non-specific serine/threonine protein kinase. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.510 |
ATM | PRKDC | ENSFALP00000000464 | ENSFALP00000006031 | Non-specific serine/threonine protein kinase. | Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.699 |
ATM | TERT | ENSFALP00000000464 | ENSFALP00000002239 | Non-specific serine/threonine protein kinase. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.655 |
ATM | XRCC5 | ENSFALP00000000464 | ENSFALP00000004139 | Non-specific serine/threonine protein kinase. | X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. | 0.948 |
ATM | XRCC6 | ENSFALP00000000464 | ENSFALP00000012453 | Non-specific serine/threonine protein kinase. | X-ray repair cross complementing 6. | 0.955 |
DCLRE1C | ATM | ENSFALP00000002004 | ENSFALP00000000464 | DNA cross-link repair 1C. | Non-specific serine/threonine protein kinase. | 0.645 |
DCLRE1C | LIG3 | ENSFALP00000002004 | ENSFALP00000010173 | DNA cross-link repair 1C. | DNA ligase. | 0.486 |
DCLRE1C | LIG4 | ENSFALP00000002004 | ENSFALP00000004386 | DNA cross-link repair 1C. | DNA ligase. | 0.893 |
DCLRE1C | MRE11 | ENSFALP00000002004 | ENSFALP00000000322 | DNA cross-link repair 1C. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.730 |
DCLRE1C | PRKDC | ENSFALP00000002004 | ENSFALP00000006031 | DNA cross-link repair 1C. | Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.981 |
DCLRE1C | XRCC5 | ENSFALP00000002004 | ENSFALP00000004139 | DNA cross-link repair 1C. | X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. | 0.950 |
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