STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZRSR2Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (476 aa)    
Predicted Functional Partners:
SRSF2
RRM domain-containing protein.
   
0.862
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.847
U3JR64_FICAL
Uncharacterized protein.
   
 0.830
SF3B1
Splicing factor 3b subunit 1.
   
 0.768
POLR2K
RNA polymerase II subunit K.
     
 0.724
RNPC3
RNA binding region (RNP1, RRM) containing 3.
   
 
 0.705
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
   
 
 0.705
SRSF7
Uncharacterized protein.
   
 0.686
U3JI53_FICAL
Uncharacterized protein.
   
 0.686
PDCD7
Programmed cell death 7.
    
  0.652
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.