STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A8Anion exchange protein. (1188 aa)    
Predicted Functional Partners:
IFT172
Intraflagellar transport 172.
      
 0.650
SLC26A7
Anion exchange transporter.
      
 0.511
SLC22A15
Solute carrier family 22 member 15.
      
 0.511
DNALI1
Dynein axonemal light intermediate chain 1.
   
  
 0.494
CLBA1
Clathrin binding box of aftiphilin containing 1.
   
    0.477
VDAC2
Voltage dependent anion channel 2.
      
 0.467
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.