STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD19BTB domain containing 19. (300 aa)    
Predicted Functional Partners:
U3JKJ6_FICAL
UBX domain-containing protein 7.
    
   0.840
MRPL3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.686
MRPL23
Uncharacterized protein.
   
 
 0.664
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.659
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.651
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.651
MRPL15
Mitochondrial ribosomal protein L15.
   
   0.627
MRPL22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.623
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.611
MRPL33
Uncharacterized protein.
   
 
 0.604
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.