STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDEM2alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (534 aa)    
Predicted Functional Partners:
EDEM3
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
0.924
EDEM1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.904
TXNDC11
Thioredoxin domain containing 11.
   
 
 0.710
XBP1
X-box binding protein 1.
     
 0.624
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.562
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.557
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
 
 
  
 0.537
MLEC
Malectin.
      
 0.523
PHF20
PHD finger protein 20.
      
 0.520
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
    
 
 0.512
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.