STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NHLH2Nescient helix-loop-helix 2. (134 aa)    
Predicted Functional Partners:
IGSF3
Immunoglobulin superfamily member 3.
      
 0.684
PTGFRN
Prostaglandin F2 receptor inhibitor.
      
 0.684
WDR3
WD repeat domain 3.
      
 0.684
GDAP2
Ganglioside induced differentiation associated protein 2.
      
 0.684
GSC
Goosecoid homeobox.
    
 0.544
TCF3
Transcription factor 3.
    
 0.538
TCF4
Uncharacterized protein.
    
 0.538
TCF12
Transcription factor 12.
    
 0.538
PCSK1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
      
 0.467
LDB1
LIM domain binding 1.
    
 0.460
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.