STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIFLIF interleukin 6 family cytokine. (165 aa)    
Predicted Functional Partners:
LIFR
LIF receptor subunit alpha.
    
 0.836
IL6ST
Interleukin 6 signal transducer.
    
 0.679
IL12RB2
Interleukin 12 receptor subunit beta 2.
    
 0.651
OSMR
Oncostatin M receptor.
  
 
 0.581
IL6
Interleukin 6.
   
 
 0.555
CNTF
Ciliary neurotrophic factor.
      
 0.547
STAT3
Signal transducer and activator of transcription.
     
 0.545
JAK1
Tyrosine-protein kinase.
     
 0.487
U3JZF7_FICAL
Uncharacterized protein.
    
   0.472
ESM1
Endothelial cell specific molecule 1.
      
 0.465
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.