STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HHEXHematopoietically expressed homeobox. (268 aa)    
Predicted Functional Partners:
OTX2
Orthodenticle homeobox 2.
   
  
 0.675
GLIS1
GLIS family zinc finger 1.
    
 
 0.672
ZNF366
Zinc finger protein 366.
   
 
 0.542
U3JQT3_FICAL
POU domain protein.
   
  
 0.532
PRRX1
Paired related homeobox 1.
      
 0.523
CDKAL1
CDK5 regulatory subunit associated protein 1 like 1.
      
 0.523
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.489
OTX1
Orthodenticle homeobox 1.
   
  
 0.479
GLIS3
GLIS family zinc finger 3.
    
 
 0.477
IRX1
Iroquois homeobox 1.
   
 
 0.470
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.