STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMC1COX assembly mitochondrial protein. (100 aa)    
Predicted Functional Partners:
AZI2
5-azacytidine induced 2.
      
 0.674
LOC101808700
Uncharacterized protein.
   
  
 0.550
COA5
Cytochrome c oxidase assembly factor 5.
   
  
 0.531
ATP23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.518
CCDC12
Coiled-coil domain containing 12.
      
 0.517
COA3
Cytochrome c oxidase assembly factor 3.
   
 
 0.451
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.444
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 
 0.433
TIMM10
Translocase of inner mitochondrial membrane 10.
   
  
 0.411
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.