STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOMER3WH1 domain-containing protein. (311 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
0.988
GRM1
Glutamate metabotropic receptor 1.
    
 0.961
HOMER2
Homer scaffold protein 2.
    
 
0.918
GRM5
Glutamate metabotropic receptor 5.
    
 0.627
DLGAP1
DLG associated protein 1.
   
 0.566
SHANK3
SAM domain-containing protein.
    
 0.554
SHANK3-2
ANK_REP_REGION domain-containing protein.
    
 0.554
THOC2
THO complex 2.
      
 0.522
CHADL
Chondroadherin like.
     
 0.521
ARHGAP26
Rho GTPase activating protein 26.
   
  
 0.519
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.