STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR19WD repeat domain 19. (1286 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport 140.
    
0.998
IFT122
Intraflagellar transport 122.
   
 0.998
WDR35
WD repeat-containing protein 35.
  
 0.995
TTC21B
Tetratricopeptide repeat domain 21B.
   
 0.988
IFT43
Intraflagellar transport 43.
    
 0.986
IFT80
Intraflagellar transport 80.
   
0.929
IFT88
Intraflagellar transport 88.
   
 
 0.903
IFT46
Intraflagellar transport 46.
     
 0.870
IFT52
Intraflagellar transport 52.
  
  
 0.862
IFT81
Intraflagellar transport 81.
     
 0.860
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.