STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARP16Poly [ADP-ribose] polymerase. (311 aa)    
Predicted Functional Partners:
PARP3
Poly [ADP-ribose] polymerase.
      
 0.521
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 0.518
CASTOR2
Uncharacterized protein.
    
 0.518
PARP1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
      
 0.509
MIOS
Meiosis regulator for oocyte development.
    
 0.491
PARP9
Poly(ADP-ribose) polymerase family member 9.
      
 0.456
PARG
Poly(ADP-ribose) glycohydrolase.
      
 0.441
RNF13
Ring finger protein 13.
    
 
 0.440
WDR59
WD repeat domain 59.
    
 0.410
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.