STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRMSTyrosine-protein kinase. (499 aa)    
Predicted Functional Partners:
LYN
Tyrosine-protein kinase.
  
0.683
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
    
 0.670
BCAR1
BCAR1 scaffold protein, Cas family member.
   
 0.658
CBL
Cbl proto-oncogene.
    
 0.623
CBLB
Cbl proto-oncogene B.
    
 0.623
PXN
Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family.
   
 0.619
CD4
Uncharacterized protein.
   
 0.606
MATK
Tyrosine-protein kinase.
  
0.594
CSK
Tyrosine-protein kinase.
  
0.587
SH2D1A
SH2 domain containing 1A.
   
 0.585
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.