STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB1Calcium and integrin binding 1. (227 aa)    
Predicted Functional Partners:
PPP3CC
Serine/threonine-protein phosphatase.
   
 0.721
PPP3CB
Serine/threonine-protein phosphatase.
   
 0.721
PPP3CA
Serine/threonine-protein phosphatase.
   
 0.721
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.698
CRY2
Cryptochrome circadian regulator 2.
      
 0.673
FKBP1B
Peptidylprolyl isomerase.
   
 0.554
FKBP3
Peptidylprolyl isomerase.
   
 0.554
FKBP1A
Peptidylprolyl isomerase.
   
 0.554
PSEN2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.546
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
      
 0.523
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.