NAF1 protein (Ficedula albicollis) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

NAF1

Nuclear assembly factor 1 ribonucleoprotein. (454 aa)

Predicted Functional Partners:

DKC1

0.991

NHP2

0.956

TRUB1

0.892

LOC101810719

0.862

U3JUK2_FICAL

0.862

TRNAU1AP

0.828

TRUB2

0.790

SHQ1

0.769

GAR1

0.708

ARFRP1

0.609

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARFRP1	NAF1	ENSFALP00000006168	ENSFALP00000011599	ADP ribosylation factor related protein 1.	Nuclear assembly factor 1 ribonucleoprotein.	0.609
DKC1	GAR1	ENSFALP00000012025	ENSFALP00000006723	Dyskerin pseudouridine synthase 1.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.999
DKC1	LOC101810719	ENSFALP00000012025	ENSFALP00000006251	Dyskerin pseudouridine synthase 1.	Uncharacterized protein.	0.972
DKC1	NAF1	ENSFALP00000012025	ENSFALP00000011599	Dyskerin pseudouridine synthase 1.	Nuclear assembly factor 1 ribonucleoprotein.	0.991
DKC1	NHP2	ENSFALP00000012025	ENSFALP00000009155	Dyskerin pseudouridine synthase 1.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.999
DKC1	SHQ1	ENSFALP00000012025	ENSFALP00000014011	Dyskerin pseudouridine synthase 1.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.998
DKC1	TRUB1	ENSFALP00000012025	ENSFALP00000002321	Dyskerin pseudouridine synthase 1.	TruB pseudouridine synthase family member 1.	0.500
DKC1	TRUB2	ENSFALP00000012025	ENSFALP00000001419	Dyskerin pseudouridine synthase 1.	TruB pseudouridine synthase family member 2.	0.476
DKC1	U3JUK2_FICAL	ENSFALP00000012025	ENSFALP00000006456	Dyskerin pseudouridine synthase 1.	Uncharacterized protein.	0.972
GAR1	DKC1	ENSFALP00000006723	ENSFALP00000012025	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Dyskerin pseudouridine synthase 1.	0.999
GAR1	LOC101810719	ENSFALP00000006723	ENSFALP00000006251	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.972
GAR1	NAF1	ENSFALP00000006723	ENSFALP00000011599	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nuclear assembly factor 1 ribonucleoprotein.	0.708
GAR1	NHP2	ENSFALP00000006723	ENSFALP00000009155	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.999
GAR1	SHQ1	ENSFALP00000006723	ENSFALP00000014011	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.946
GAR1	TRUB1	ENSFALP00000006723	ENSFALP00000002321	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	TruB pseudouridine synthase family member 1.	0.978
GAR1	TRUB2	ENSFALP00000006723	ENSFALP00000001419	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	TruB pseudouridine synthase family member 2.	0.938
GAR1	U3JUK2_FICAL	ENSFALP00000006723	ENSFALP00000006456	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.972
LOC101810719	DKC1	ENSFALP00000006251	ENSFALP00000012025	Uncharacterized protein.	Dyskerin pseudouridine synthase 1.	0.972
LOC101810719	GAR1	ENSFALP00000006251	ENSFALP00000006723	Uncharacterized protein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.972
LOC101810719	NAF1	ENSFALP00000006251	ENSFALP00000011599	Uncharacterized protein.	Nuclear assembly factor 1 ribonucleoprotein.	0.862