STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMBEmbigin. (319 aa)    
Predicted Functional Partners:
SLC16A1
Solute carrier family 16 member 1.
    
 0.902
SLC16A7
Solute carrier family 16 member 7.
    
 0.884
SLC16A3
Solute carrier family 16 member 3.
    
 0.723
SLC16A8
Solute carrier family 16 member 8.
    
 0.599
SLC16A4
Solute carrier family 16 member 4.
   
 0.559
SLC16A6
Solute carrier family 16 member 6.
   
 0.547
U3K7Q8_FICAL
MFS domain-containing protein.
   
 0.547
SLC16A14
Solute carrier family 16 member 14.
    
 0.543
PRCP
Prolylcarboxypeptidase.
      
 0.524
LOC101808279
MFS domain-containing protein.
   
 0.522
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.