STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF3Transcription factor 3. (632 aa)    
Predicted Functional Partners:
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.818
MYOD1
Myogenic factor.
    
 0.725
ASCL2
Achaete-scute family bHLH transcription factor 2.
   
 0.720
LMO2
LIM domain only 2.
    
 0.696
MYF5
Myogenic factor.
    
 0.695
CTNNB1
Catenin beta 1.
    
 0.664
MYOG
Myogenin.
   
 0.641
MYF6
Myogenic factor 6.
    
 0.622
TCF21
Transcription factor 21.
    
 0.594
LDB1
LIM domain binding 1.
   
 0.582
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.