STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (72 aa)    
Predicted Functional Partners:
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.999
RPL27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
RPS13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.999
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
RPL7A
Ribosomal_L7Ae domain-containing protein.
   
 0.999
RPL8
Ribosomal protein L8.
   
 
 0.999
RPL39
Ribosomal protein L39.
   
 0.999
RPL5
Ribosomal protein L5.
   
 0.999
RPL37
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.999
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.999
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.