STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RYR2Ryanodine receptor 2. (4972 aa)    
Predicted Functional Partners:
PRKACB
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.935
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.931
CAMK2A
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.907
CAMK2G
Calcium/calmodulin dependent protein kinase II gamma.
   
 
 0.903
PPP2CA
Serine/threonine-protein phosphatase.
    
 0.903
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.903
PPP2R3B
Uncharacterized protein.
     
 0.902
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.902
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.902
PPP2R3A
Protein phosphatase 2 regulatory subunit B''alpha.
     
 0.902
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.