STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPGS1Tubulin polyglutamylase complex subunit 1. (161 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 0.773
NICN1
Uncharacterized protein.
    
 0.749
TTLL1
Tubulin tyrosine ligase like 1.
    
 0.727
TTC13
Tetratricopeptide repeat domain 13.
      
 0.674
CATIP
Ciliogenesis associated TTC17 interacting protein.
      
 0.674
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
 0.648
AK8
Uncharacterized protein; Belongs to the adenylate kinase family.
      
 0.577
TTL
Uncharacterized protein.
    
 0.528
CCDC177
Uncharacterized protein.
      
 0.457
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.