STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_024081Heat shock protein Hsp90. (246 aa)    
Predicted Functional Partners:
Ccrd_011431
CS domain-containing protein.
   
 0.995
Ccrd_011222
Heat shock protein Hsp90.
 
  
  0.994
Ccrd_016988
CS domain-containing protein.
   
 0.978
Ccrd_010828
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain-containing protein.
  
 0.864
Ccrd_005406
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain-containing protein.
  
 0.851
Ccrd_022357
Uncharacterized protein.
  
 0.837
Ccrd_013120
Ankyrin repeat-containing protein.
  
 0.837
Ccrd_003467
CS domain-containing protein.
   
 0.814
Ccrd_021728
CS domain-containing protein.
   
 0.814
Ccrd_014400
CS domain-containing protein.
   
 0.814
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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