STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_026862Glucose/ribitol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (214 aa)    
Predicted Functional Partners:
Ccrd_012968
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
   
 0.997
Ccrd_011822
3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal.
   
 0.993
Ccrd_016772
S5A_REDUCTASE domain-containing protein.
   
 0.993
Ccrd_004725
3-ketoacyl-CoA synthase.
    
 0.920
Ccrd_023373
3-ketoacyl-CoA synthase.
    
 0.920
Ccrd_019730
3-ketoacyl-CoA synthase.
    
 0.920
Ccrd_008291
3-ketoacyl-CoA synthase.
   
 0.906
Ccrd_006704
3-ketoacyl-CoA synthase.
   
 0.906
Ccrd_024694
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.902
Ccrd_019264
Glucose/ribitol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.901
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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