STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_026665F-box domain-containing protein. (193 aa)    
Predicted Functional Partners:
Ccrd_001696
Transcriptional factor DELLA, N-terminal; Belongs to the GRAS family.
    
 0.946
Ccrd_016234
Transcriptional factor DELLA, N-terminal; Belongs to the GRAS family.
    
 0.946
Ccrd_012998
Transcriptional factor DELLA, N-terminal; Belongs to the GRAS family.
    
 0.946
Ccrd_000224
Transcriptional factor DELLA, N-terminal; Belongs to the GRAS family.
    
 0.946
Ccrd_023481
F-box domain-containing protein.
  
  
 
0.902
Ccrd_014930
F-box domain, cyclin-like protein.
  
  
 
0.901
Ccrd_025202
Uncharacterized protein.
  
     0.501
Ccrd_007365
Plant organelle RNA recognition domain-containing protein.
  
     0.491
Ccrd_007948
NPH3 domain-containing protein; Belongs to the NPH3 family.
  
     0.462
Ccrd_008047
Uncharacterized protein.
  
     0.459
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.