STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_026450EEIG1/EHBP1 N-terminal domain-containing protein. (788 aa)    
Predicted Functional Partners:
Ccrd_025441
X8-like protein.
  
     0.482
Ccrd_015085
Homeodomain-like protein.
  
     0.462
Ccrd_002913
X8-like protein.
  
     0.455
Ccrd_013600
Uncharacterized protein.
  
     0.451
Ccrd_018688
Uncharacterized protein.
  
     0.438
Ccrd_013415
GDP-fucose protein O-fucosyltransferase.
  
     0.430
Ccrd_023353
SH3 domain-containing protein.
  
     0.429
Ccrd_012217
Uncharacterized protein.
  
     0.428
Ccrd_010736
Uncharacterized protein.
  
     0.428
Ccrd_004037
PRONE domain-containing protein.
  
     0.417
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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