STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_025693Bud13. (549 aa)    
Predicted Functional Partners:
Ccrd_003869
Nucleotide-binding, alpha-beta plait.
   
 0.992
Ccrd_022801
Forkhead-associated (FHA) domain-containing protein.
   
 0.989
Ccrd_016885
Uncharacterized protein.
    
 
 0.967
Ccrd_016692
Armadillo-type fold.
   
 
 0.957
Ccrd_007014
Armadillo-like helical.
    
 
 0.947
Ccrd_020192
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain-containing protein.
    
 0.947
Ccrd_007989
RNA-processing protein, HAT helix.
   
 
 0.947
Ccrd_023741
JAB1/Mov34/MPN/PAD-1.
    
 
 0.941
Ccrd_003323
Splicing factor subunit; Belongs to the SF3B5 family.
    
 
 0.938
Ccrd_024035
Uncharacterized protein.
   
 
 0.934
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.