Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_006077 | Ccrd_011898 | A0A103XJI1 | A0A118K5V9 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.504 |
Ccrd_006077 | Ccrd_012275 | A0A103XJI1 | A0A103YHU8 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.516 |
Ccrd_006077 | Ccrd_016669 | A0A103XJI1 | A0A118K2X9 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.524 |
Ccrd_006077 | Ccrd_018827 | A0A103XJI1 | A0A103Y5H7 | Methyltransferase. | Methyltransferase. | 0.572 |
Ccrd_006077 | Ccrd_025336 | A0A103XJI1 | A0A103XB18 | Methyltransferase. | OBERON-like protein; Probable transcription factor. | 0.532 |
Ccrd_006517 | Ccrd_011898 | A0A103XIK7 | A0A118K5V9 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.522 |
Ccrd_006517 | Ccrd_012275 | A0A103XIK7 | A0A103YHU8 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.524 |
Ccrd_006517 | Ccrd_016669 | A0A103XIK7 | A0A118K2X9 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.536 |
Ccrd_006517 | Ccrd_025336 | A0A103XIK7 | A0A103XB18 | Methyltransferase. | OBERON-like protein; Probable transcription factor. | 0.534 |
Ccrd_011480 | Ccrd_011898 | A0A103YJ63 | A0A118K5V9 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.523 |
Ccrd_011480 | Ccrd_012275 | A0A103YJ63 | A0A103YHU8 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.528 |
Ccrd_011480 | Ccrd_016669 | A0A103YJ63 | A0A118K2X9 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.530 |
Ccrd_011480 | Ccrd_025336 | A0A103YJ63 | A0A103XB18 | Methyltransferase. | OBERON-like protein; Probable transcription factor. | 0.532 |
Ccrd_011898 | Ccrd_006077 | A0A118K5V9 | A0A103XJI1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.504 |
Ccrd_011898 | Ccrd_006517 | A0A118K5V9 | A0A103XIK7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.522 |
Ccrd_011898 | Ccrd_011480 | A0A118K5V9 | A0A103YJ63 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.523 |
Ccrd_011898 | Ccrd_016120 | A0A118K5V9 | A0A103YAK8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.517 |
Ccrd_011898 | Ccrd_018827 | A0A118K5V9 | A0A103Y5H7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.514 |
Ccrd_011898 | Ccrd_024473 | A0A118K5V9 | A0A124SAP4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.519 |
Ccrd_011898 | Ccrd_025336 | A0A118K5V9 | A0A103XB18 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | OBERON-like protein; Probable transcription factor. | 0.534 |
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