STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_025119Uncharacterized protein. (215 aa)    
Predicted Functional Partners:
Ccrd_024251
Development/cell death domain-containing protein.
  
     0.457
Ccrd_014923
Development/cell death domain-containing protein.
  
     0.456
Ccrd_013608
Rho GTPase-activating protein domain-containing protein.
  
     0.451
Ccrd_005084
Development/cell death domain-containing protein.
  
     0.445
Ccrd_016858
Uncharacterized protein.
  
     0.438
Ccrd_005415
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
     0.429
Ccrd_012563
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
     0.429
Ccrd_014986
Uncharacterized protein.
  
     0.429
Ccrd_018711
Auxin efflux carrier.
  
    0.426
Ccrd_014268
Sulfotransferase domain-containing protein.
  
     0.424
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.