STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_024832GDP-fucose protein O-fucosyltransferase. (346 aa)    
Predicted Functional Partners:
Ccrd_008481
Uncharacterized protein.
  
   
 0.507
Ccrd_004701
Uncharacterized protein.
  
     0.507
Ccrd_022199
Uncharacterized protein.
  
     0.504
Ccrd_019748
Uncharacterized protein.
  
     0.504
Ccrd_006753
Uncharacterized protein.
  
     0.499
Ccrd_019498
Uncharacterized protein.
  
   
 0.489
Ccrd_019499
Uncharacterized protein.
  
   
 0.479
Ccrd_010420
Uncharacterized protein.
  
     0.475
Ccrd_013554
Terpene synthase, metal-binding domain-containing protein; Belongs to the terpene synthase family.
  
     0.471
Ccrd_012817
Dehydrin; Belongs to the plant dehydrin family.
  
     0.470
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.