STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_024717NSF attachment protein. (309 aa)    
Predicted Functional Partners:
Ccrd_014026
Secretory pathway Sec39.
    
 0.944
Ccrd_026381
Uncharacterized protein.
   
 0.937
Ccrd_018663
AAA+ ATPase domain-containing protein.
   
 0.937
Ccrd_011084
AAA+ ATPase domain-containing protein.
   
 0.937
Ccrd_019970
Syntaxin, N-terminal.
    
 0.934
Ccrd_003219
NSF attachment protein.
   
 0.923
Ccrd_011614
NSF attachment protein.
   
 0.923
Ccrd_009508
NSF attachment protein.
   
 0.923
Ccrd_014604
NSF attachment protein.
   
 0.923
Ccrd_002758
Syntaxin/epimorphin, conserved site-containing protein; Belongs to the syntaxin family.
    
 0.879
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.