Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_026903Protein kinase, ATP binding site-containing protein. (699 aa)    
Predicted Functional Partners:
Ccrd_001681
Uncharacterized protein.
    
 
 0.919
Ccrd_018926
Histone chaperone, ASF1-like protein.
    
 
 0.919
Ccrd_007302
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.754
Ccrd_020192
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain-containing protein.
   
   0.737
Ccrd_003080
Rad9.
    
 
 0.720
Ccrd_007989
RNA-processing protein, HAT helix.
   
   0.663
Ccrd_009773
Cyclin C/H/T/L.
      
 0.662
Ccrd_012115
Homeodomain-like protein.
    
 
 0.657
Ccrd_012114
Uncharacterized protein.
    
 
 0.657
Ccrd_008977
Zinc finger, CCCH-type.
   
   0.649
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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