STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_025399CAP Gly-rich domain-containing protein. (573 aa)    
Predicted Functional Partners:
Ccrd_014584
Glycerol-3-phosphate dehydrogenase [NAD(+)].
      
 0.739
Ccrd_007513
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
      
 0.722
Ccrd_021789
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
      
 0.722
Ccrd_025239
YTH domain-containing protein.
      
 0.700
Ccrd_006702
Uncharacterized protein.
      
 0.700
Ccrd_000521
Zinc finger, CCCH-type.
      
 0.700
Ccrd_014253
CAP Gly-rich domain-containing protein.
      
0.689
Ccrd_008812
Armadillo-like helical.
      
 0.682
Ccrd_002203
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.682
Ccrd_017377
CARP motif-containing protein.
      
 0.682
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.