STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_008771Aquaporin-like protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (253 aa)    
Predicted Functional Partners:
Ccrd_026760
DAO_C domain-containing protein.
  
  
 0.529
Ccrd_016650
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.529
Ccrd_020067
Aquaporin-like protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
     0.492
Ccrd_002676
Aquaporin-like protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
     0.473
Ccrd_010012
Uncharacterized protein.
   
 0.461
Ccrd_025617
Carbohydrate kinase, FGGY, conserved site-containing protein.
  
 
 0.443
Ccrd_024030
AAA+ ATPase domain-containing protein.
  
 
 0.443
Ccrd_005066
26S proteasome subunit P45; Belongs to the AAA ATPase family.
  
 
 0.443
Ccrd_004954
AAA+ ATPase domain-containing protein; Belongs to the AAA ATPase family.
  
 
 0.443
Ccrd_003687
AAA+ ATPase domain-containing protein; Belongs to the AAA ATPase family.
  
 
 0.443
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.