Ccrd_007060 protein (Cynara cardunculus) - STRING interaction network

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Score

Ccrd_007060

Survival motor neuron interacting protein 1. (496 aa)

Predicted Functional Partners:

Ccrd_014223

0.688

Ccrd_005062

0.671

Ccrd_025013

0.612

Ccrd_025014

0.612

Ccrd_009142

0.577

Ccrd_003535

0.577

Ccrd_003455

0.562

Ccrd_009088

0.562

Ccrd_001565

0.541

Ccrd_011940

0.541

Your Current Organism:

Cynara cardunculus

NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ccrd_001565	Ccrd_003455	A0A103XT35	A0A103XPE1	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.995
Ccrd_001565	Ccrd_003535	A0A103XT35	A0A124SCN9	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.994
Ccrd_001565	Ccrd_005062	A0A103XT35	A0A118JUR4	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Ccrd_001565	Ccrd_007060	A0A103XT35	A0A103XHT7	Uncharacterized protein.	Survival motor neuron interacting protein 1.	0.541
Ccrd_001565	Ccrd_009088	A0A103XT35	A0A103YNP2	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.995
Ccrd_001565	Ccrd_009142	A0A103XT35	A0A103YNS7	Uncharacterized protein.	Like-Sm (LSM) domain-containing protein.	0.994
Ccrd_003455	Ccrd_001565	A0A103XPE1	A0A103XT35	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.995
Ccrd_003455	Ccrd_003535	A0A103XPE1	A0A124SCN9	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.992
Ccrd_003455	Ccrd_005062	A0A103XPE1	A0A118JUR4	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
Ccrd_003455	Ccrd_007060	A0A103XPE1	A0A103XHT7	Small nuclear ribonucleoprotein Sm D2.	Survival motor neuron interacting protein 1.	0.562
Ccrd_003455	Ccrd_009142	A0A103XPE1	A0A103YNS7	Small nuclear ribonucleoprotein Sm D2.	Like-Sm (LSM) domain-containing protein.	0.992
Ccrd_003455	Ccrd_011940	A0A103XPE1	A0A103YIG5	Small nuclear ribonucleoprotein Sm D2.	Like-Sm (LSM) domain-containing protein.	0.995
Ccrd_003535	Ccrd_001565	A0A124SCN9	A0A103XT35	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.994
Ccrd_003535	Ccrd_003455	A0A124SCN9	A0A103XPE1	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.992
Ccrd_003535	Ccrd_005062	A0A124SCN9	A0A118JUR4	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Ccrd_003535	Ccrd_007060	A0A124SCN9	A0A103XHT7	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Survival motor neuron interacting protein 1.	0.577
Ccrd_003535	Ccrd_009088	A0A124SCN9	A0A103YNP2	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
Ccrd_003535	Ccrd_009142	A0A124SCN9	A0A103YNS7	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Like-Sm (LSM) domain-containing protein.	0.902
Ccrd_003535	Ccrd_011940	A0A124SCN9	A0A103YIG5	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Like-Sm (LSM) domain-containing protein.	0.999
Ccrd_005062	Ccrd_001565	A0A118JUR4	A0A103XT35	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.999

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