STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_006862Protein kinase, ATP binding site-containing protein; Belongs to the protein kinase superfamily. (324 aa)    
Predicted Functional Partners:
Ccrd_009109
Protein kinase, ATP binding site-containing protein; Belongs to the protein kinase superfamily.
  
0.939
Ccrd_002187
Cyclin-like protein.
   
 0.908
Ccrd_010624
Origin recognition complex, subunit 2.
   
 0.906
Ccrd_007593
Rhodanese-like domain-containing protein.
   
 0.905
Ccrd_017299
Protein kinase, ATP binding site-containing protein; Belongs to the protein kinase superfamily.
  
 
0.888
Ccrd_007254
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.887
Ccrd_021606
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.887
Ccrd_003872
AAA+ ATPase domain-containing protein.
   
 0.872
Ccrd_023711
CDC6, C-terminal domain-containing protein.
   
 0.872
Ccrd_026272
DNA helicase.
   
 0.860
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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