STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_006644Aldo/keto reductase. (425 aa)    
Predicted Functional Partners:
Ccrd_017550
Aldo/keto reductase.
  
 0.733
Ccrd_006157
WD40 repeat-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.644
Ccrd_007873
G-protein beta WD-40 repeat-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.606
Ccrd_000650
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.606
Ccrd_008054
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.603
Ccrd_004968
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.603
Ccrd_015682
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.603
Ccrd_018349
Aldo/keto reductase.
  
 0.563
Ccrd_026192
Aldo/keto reductase.
  
 0.563
Ccrd_009391
Aldo/keto reductase.
  
 0.563
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.