STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_006614Structural maintenance of chromosomes protein. (1194 aa)    
Predicted Functional Partners:
Ccrd_019159
Structural maintenance of chromosomes protein.
   
0.999
Ccrd_013012
Cnd3 domain-containing protein.
   
 0.999
Ccrd_009460
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.999
Ccrd_019682
Condensin complex subunit 2/barren.
   
 0.998
Ccrd_010917
Condensin complex subunit 2/barren.
   
 0.998
Ccrd_005764
Armadillo-like helical.
   
 0.997
Ccrd_002845
Non-SMC condensin II complex, subunit H2-like protein.
   
 0.997
Ccrd_024815
Condensin-2 complex subunit G2.
   
 0.985
Ccrd_005504
Armadillo-like helical.
   
 0.985
Ccrd_013616
Structural maintenance of chromosomes protein.
   
 
0.958
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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