STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_006459Ribosomal protein S11. (135 aa)    
Predicted Functional Partners:
Ccrd_022305
Ribosomal protein S8.
  
 0.994
Ccrd_024938
Ribosomal_S7 domain-containing protein.
 
 0.993
Ccrd_003963
Ribosomal protein S16.
  
 0.989
Ccrd_004229
Ribosomal protein S6.
  
 0.987
Ccrd_000846
Ribosomal protein S18.
   
 0.986
Ccrd_000175
Ribosomal protein S14.
  
 0.986
Ccrd_002810
Double-stranded RNA-binding-like domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.985
Ccrd_020461
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
 
 
 0.984
Ccrd_017323
Ribosomal protein L10e/L16.
 
 
 0.980
Ccrd_026801
Ribosomal protein S5 domain 2-type fold; Belongs to the universal ribosomal protein uS9 family.
  
 0.973
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.