STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_006356Receptor-like serine/threonine-protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (717 aa)    
Predicted Functional Partners:
Ccrd_006994
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.877
Ccrd_013373
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.877
Ccrd_000175
Ribosomal protein S14.
   
 
 0.820
Ccrd_004229
Ribosomal protein S6.
  
 
 0.811
Ccrd_009195
Ribosomal protein L33.
  
 
 0.788
Ccrd_003963
Ribosomal protein S16.
  
 
 0.786
Ccrd_007984
Elongation factor, GTP-binding domain-containing protein.
  
 0.771
Ccrd_011024
Elongation factor, GTP-binding domain-containing protein.
  
 0.771
Ccrd_025309
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.762
Ccrd_013195
Ribosomal protein L1.
   
 
 0.751
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.