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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_006151Protein kinase-like domain-containing protein. (970 aa)    
Predicted Functional Partners:
Ccrd_006567
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.941
Ccrd_014353
Cryptochrome C-terminal.
    
 0.932
Ccrd_006890
G-protein beta WD-40 repeat-containing protein.
  
  
 
0.906
Ccrd_011008
Translation initiation factor 2, alpha subunit, C-terminal.
   
 0.790
Ccrd_024895
Nucleic acid-binding, OB-fold.
   
 0.790
Ccrd_005984
Nucleic acid-binding, OB-fold.
   
 0.790
Ccrd_005985
Nucleic acid-binding, OB-fold.
   
 0.790
Ccrd_021270
Elongation factor, GTP-binding domain-containing protein.
   
 
 0.722
Ccrd_008026
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
    
 0.635
Ccrd_006196
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
    
 0.635
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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