STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_005405Ribosomal_TL5_C domain-containing protein. (266 aa)    
Predicted Functional Partners:
Ccrd_004229
Ribosomal protein S6.
  
 
 0.999
Ccrd_003963
Ribosomal protein S16.
  
 
 0.999
Ccrd_024953
Ribosomal protein S5 domain 2-type fold; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.999
Ccrd_026801
Ribosomal protein S5 domain 2-type fold; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.999
Ccrd_007252
Ribosomal protein L9.
  
 
 0.998
Ccrd_000928
Ribosomal protein L21.
  
 
 0.998
Ccrd_022964
Ribosomal protein L21.
  
 
 0.998
Ccrd_016847
Ribosomal protein L27.
  
 
 0.998
Ccrd_015108
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.998
Ccrd_012390
Ribosomal protein L27.
  
 
 0.998
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.