STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_004839Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. (226 aa)    
Predicted Functional Partners:
Ccrd_020461
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
 
 0.991
Ccrd_025309
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.983
Ccrd_019455
KOW-like protein; Belongs to the universal ribosomal protein uL24 family.
  
 0.983
Ccrd_004229
Ribosomal protein S6.
   
 
 0.981
Ccrd_003963
Ribosomal protein S16.
   
 
 0.981
Ccrd_008944
Ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family.
  
 0.980
Ccrd_000712
Ribosomal protein L3.
  
 0.978
Ccrd_000175
Ribosomal protein S14.
  
 
 0.978
Ccrd_012390
Ribosomal protein L27.
  
 
 0.977
Ccrd_009195
Ribosomal protein L33.
  
 
 0.977
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.