STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_004657Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
Ccrd_004549
Glycosyltransferase AER61, uncharacterized.
  
   
 0.564
Ccrd_012229
Peptidase S8A, DUF1034 C-terminal.
      
 0.523
Ccrd_010369
LURP1-like domain-containing protein.
  
     0.514
Ccrd_015004
Uncharacterized protein.
  
     0.513
Ccrd_004059
Uncharacterized protein.
  
     0.464
Ccrd_008786
Syntaxin 6, N-terminal.
  
     0.457
Ccrd_010006
Uncharacterized protein.
  
     0.454
Ccrd_013998
Uncharacterized protein.
  
     0.447
Ccrd_020880
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.432
Ccrd_018567
Phloem protein 2-like protein.
  
     0.428
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.