STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_004325Actin-related protein. (85 aa)    
Predicted Functional Partners:
Ccrd_025334
ARP2/3 complex, 34kDa subunit (p34-Arc).
   
 0.983
Ccrd_011901
Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
   
 0.981
Ccrd_020394
ARP2/3 complex, 21kDa subunit (p21-Arc).
   
 0.969
Ccrd_009893
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.969
Ccrd_024689
Actin-related protein; Belongs to the actin family.
  
0.960
Ccrd_002259
Actin-related protein; Belongs to the actin family.
  
0.960
Ccrd_006999
ARP2/3 complex, 20kDa subunit (P20-Arc).
   
 0.960
Ccrd_021421
ARP2/3 complex, 20kDa subunit (P20-Arc).
   
 0.960
Ccrd_021281
Uncharacterized protein.
   
 0.960
Ccrd_016856
Tetratricopeptide-like helical.
   
 0.959
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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