STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_003658Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (798 aa)    
Predicted Functional Partners:
Ccrd_009856
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
0.932
Ccrd_008551
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
0.810
Ccrd_025168
Armadillo-type fold.
   
 0.807
Ccrd_025216
Armadillo-type fold.
   
 0.807
Ccrd_004277
Armadillo-type fold.
   
 0.807
Ccrd_021197
Armadillo-type fold.
   
 0.807
Ccrd_000750
Armadillo-type fold.
   
 0.807
Ccrd_011366
Armadillo-type fold.
    
 
 0.764
Ccrd_014360
Peptidylprolyl isomerase.
   
 0.760
Ccrd_003012
WD_REPEATS_REGION domain-containing protein.
    
 0.742
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.