STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_002721CAAX amino terminal protease. (361 aa)    
Predicted Functional Partners:
Ccrd_013009
B-cell receptor-associated 31-like protein.
  
     0.512
Ccrd_023299
Glycosyl-phosphatidyl inositol-anchored, plant.
  
     0.504
Ccrd_015222
Zinc finger, RING/FYVE/PHD-type.
  
     0.501
Ccrd_022506
Zinc finger, RING/FYVE/PHD-type.
  
     0.501
Ccrd_017660
GDP-fucose protein O-fucosyltransferase.
  
     0.500
Ccrd_022630
RNA-binding, CRM domain-containing protein.
  
     0.495
Ccrd_012534
RING-type domain-containing protein.
  
     0.495
Ccrd_000206
Uncharacterized protein.
  
     0.491
Ccrd_012178
PC-Esterase.
  
     0.490
Ccrd_004990
Homeodomain-containing protein.
  
     0.489
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.